Caldanaerobius
| Caldanaerobius | |
|---|---|
| Scientific classification | |
| Domain: | Bacteria |
| Kingdom: | Bacillati |
| Phylum: | Bacillota |
| Class: | Clostridia |
| Order: | Thermoanaerobacterales |
| Family: | Thermoanaerobacteraceae |
| Genus: | Caldanaerobius Lee et al. 2008 |
| Type species | |
| Caldanaerobius fijiensis Lee et al. 2008
| |
| Species[1] | |
| Synonyms[2] | |
|
Caldanaerobium (sic) | |
Caldanaerobius is a genus of thermophilic, obligately anaerobic bacteria from the family Thermoanaerobacteraceae.[1][2][3][4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]
| 16S rRNA based LTP_10_2024[6][7][8] | 120 marker proteins based GTDB 10-RS226[9][10][11] | ||||||||||||||||||
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See also
References
- ^ a b c Caldanaerobius in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1–D12. doi:10.1093/nar/gkaf1110.
- ^ a b "Caldanaerobius". www.uniprot.org.
- ^ Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). Parker, Charles Thomas; Garrity, George M. (eds.). "Nomenclature Abstract for Caldanaerobius Lee et al. 2008". The NamesforLife Abstracts. doi:10.1601/nm.13068.
- ^ Vos, Paul; Garrity, George; Jones, Dorothy; Krieg, Noel R.; Ludwig, Wolfgang; Rainey, Fred A.; Schleifer, Karl-Heinz; Whitman, William B. (2011). Bergey's Manual of Systematic Bacteriology: Volume 3: The Firmicutes. Springer Science & Business Media. ISBN 9780387684895.
- ^ Schoch CL; et al. "Caldanaerobius". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-06-05.
- ^ "The LTP". Retrieved 10 December 2024.
- ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ^ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
- ^ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.
Further reading
- Lee, YJ; Mackie, RI; Cann, IK; Wiegel, J (March 2008). "Description of Caldanaerobius fijiensis gen. nov., sp. nov., an inulin-degrading, ethanol-producing, thermophilic bacterium from a Fijian hot spring sediment, and reclassification of Thermoanaerobacterium polysaccharolyticum and Thermoanaerobacterium zeae as Caldanaerobius polysaccharolyticus comb. nov. and Caldanaerobius zeae comb. nov". International Journal of Systematic and Evolutionary Microbiology. 58 (Pt 3): 666–70. doi:10.1099/ijs.0.65329-0. PMID 18319475.
- Wefers, Daniel; Dong, Jia; Abdel-Hamid, Ahmed M.; Paul, Hans Müller; Pereira, Gabriel V.; Han, Yejun; Dodd, Dylan; Baskaran, Ramiya; Mayer, Beth; Mackie, Roderick I.; Cann, Isaac; Kelly, Robert M. (15 September 2017). "Enzymatic Mechanism for Arabinan Degradation and Transport in the Thermophilic Bacterium Caldanaerobius polysaccharolyticus". Applied and Environmental Microbiology. 83 (18): e00794-17. Bibcode:2017ApEnM..83E.794W. doi:10.1128/AEM.00794-17. PMC 5583487. PMID 28710263.