Anthony Nicholls (physicist)

Anthony Nicholls
Nicholls in 2013
Born
EducationUniversity of Oxford,
Florida State University (Ph.D.),
Columbia University (postdoc)
Known forDelPhi rewrite
Graphical Representation and Analysis of Structural Properties (GRASP)
OpenEye Scientific Software (founder)
Scientific career
Fieldsphysics, chemistry, molecular biophysics
InstitutionsFlorida State University,
OpenEye Scientific Software,
Worldwide Protein Data Bank
Thesis (1988)
William Rhodes
Other academic advisors
Barry Honig

Anthony (Ant) Nicholls is a physicist and entrepreneur from Plympton, Plymouth, England.

Education

Nicholls was educated at Plympton Grammar School and then from 1979–1982 studied Physics at the University of Oxford before joining the Institute for Molecular Biophysics at Florida State University. There he studied quantum dispersion of excitations in biological systems with William Rhodes, and in football with coach Bobby Bowden. He earned his Doctor of Philosophy (Ph.D.) in biophysics in 1988 and began as a postdoctoral researcher (postdoc) with Barry Honig at Columbia University, New York City.

Software development

Nicholls has worked mainly in molecular biophysics, designing software that is used in drug discovery uses.

While at Columbia University, he re-wrote the electrostatics program named DelPhi. DelPhi took input from a coordinate file format of a molecule and calculated the electrostatic potential in and around the system, using a finite difference solution to the Poisson–Boltzmann equation.

Nicholls later wrote the graphics software Graphical Representation and Analysis of Structural Properties (GRASP).[1] GRASP is a graphics program written for Silicon Graphics computers that was used by the structural biology community to visualize macromolecules. It was the most widely used software for computing and displaying polyhedral molecular surfaces during the 1990s.

Business

Work conducted on DelPhi and GRASP continues to be the intellectual property of Columbia University. As a result, Nicholls consulted with David Weininger, and decided in 1997 to found OpenEye Scientific Software in Santa Fe, New Mexico.[2][3] Nicholls has been termed the "Steve Jobs of the Info Mesa" regarding his work at OpenEye.[4] OpenEye has employed several notable people in cheminformatics, including RasMol developer Roger Sayle. OpenEye was acquired by Cadence Design Systems in September 2022.[5] In early 2025, Nicholls announced his retirement from OpenEye.[6]

Nicholls was also Chair of the Worldwide Protein Data Bank.[3]

References

  1. ^ Staff (1 June 2000). Written at Santa Fe, New Mexico. "Greetings from Info Mesa". Wired. San Francisco, California. Retrieved 8 May 2026.
  2. ^ Staff (2026). "About us: Leadership & Commercial Team". Cadence Molecular Sciences. Santa Fe, New Mexico. Retrieved 4 May 2026.
  3. ^ a b Staff (2026). "Anthony Nicholls, Ph.D.: President and CEO at OpenEye Scientific". Dart Neuroscience. Retrieved 4 May 2026.
  4. ^ Regis, Edward (May 2003). Written at Santa Fe, New Mexico. The Info Mesa: Science, Business, and New Age Alchemy on the Santa Fe Plateau. New York City: W. W. Norton & Company. ISBN 978-0393341577.
  5. ^ Staff (1 September 2022). "Cadence Completes Acquisition of OpenEye Scientific". Cadence Molecular Sciences. Santa Fe, New Mexico. Retrieved 8 May 2026.
  6. ^ Staff (29 January 2025). "Cadence Announces New Life Sciences Leadership". Cadence Molecular Sciences. Santa Fe, New Mexico. Retrieved 4 May 2026.