5'-nucleotidase

5′-nucleotidase
Human ecto-5′-nucleotidase (CD73): crystal form I (open) in complex with adenosine[1]
Identifiers
EC no.3.1.3.5
CAS no.9027-73-0
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5′-nucleotidase (EC 3.1.3.5) is an enzyme which catalyzes the phosphorylytic cleavage of 5′-nucleotides.[2] Although originally found in snake venom,[3] the activity of 5′-nucleotidase has been described for bacteria and plant cells, and is widely distributed in vertebrate tissue.[4] In mammalian cells the enzyme is predominantly located in the plasma membrane and its primary role is in the conversion of extracellular nucleotides (e.g. 5′-AMP), which are generally impermeable, to the corresponding nucleoside (e.g. adenosine) which can readily enter most cells.[5] Consequently, the enzyme plays a key role in the metabolism of nucleotides.

The enzyme has a wide substrate specificity for nucleotides and has been shown to hydrolyze 5′-nucleotides rapidly, ribose-5-phosphate slowly, and other phosphate esters extremely slowly (if at all).[6]

The enzyme catalyses the following reaction:

a 5′-nucleotide + H2O ⇌ a nucleoside + phosphate

The 5′-nucleotidase-catalyzed reaction of an AMP nucleotide to adenosine nucleoside is shown below:

Nomenclature

  • Accepted Name: 5′-nucleotidase
  • Systematic Name: 5′-ribonucleotide phosphohydrolase
  • Synonyms: uridine 5′-nucleotidase, 5′-adenylic phosphatase, adenosine 5′-phosphatase, AMP phosphatase, adenosine monophosphatase, 5′-mononucleotidase, AMPase, UMPase, snake venom 5′-nucleotidase, thymidine monophosphate nucleotidase, 5′-AMPase, 5′-AMP nucleotidase, AMP phosphohydrolase, IMP 5′-nucleotidase.[7][8][9]

Structure

Active site

Studies of the soluble form of human ecto-5′-nucleotidase, without a GPI anchor, have shown that the C-terminal domain holds the substrate-binding pocket, and that the aromatic purine motif of the substrate is stacked between two phenylalanine residues.[10] Furthermore, a catalytic mechanism has been proposed involving an in-line nucleophilic attack by a hydroxyl moiety that is coordinated by zinc on the substrate phosphorus, with the nucleoside acting as a leaving group.[10]

Membrane-bound and soluble forms

Studies of mammalian 5′-nucleotidases have shown that there exist at least four different forms of the 5′-nucleotidase enzyme: one membrane-bound form and three soluble forms.[4] The membrane-bound form is anchored to the plasma membrane via GPI at its C-terminus.[4] One of the soluble forms appears to be derived from the GPI-anchored ex-5′-nucleotidase and has an extracellular location.[4] The two cytosolic forms of the enzyme have similar characteristics, but can be differentiated on the basis of their preferential affinities for nucleotide substrates.[4] The GPI-anchored form exists as a dimer, with the two subunits linked via a disulfide bridge. The soluble forms can exist as dimers or tetramers. Generally at least 50% of the enzyme is found in the surface-bound form.[4]

Medical relevance

5′ nucleotidase blood test

The concentration of 5′-nucleotidase protein in the blood is often used as a liver function test in individuals that show signs of liver problems. The combined assays of serum 5′-nucleotisase and alkaline phosphatase (AP) activities are extremely helpful in differential diagnosis since serum 5′-nucleotidase activity is increased in obstructive hepatobiliary disorders, but not in osseous disorders, whereas serum AP activity is generally increased in both categories of diseases.[11] In other words, the test is used to determine if elevated protein levels are due to skeletal damage or liver damage.[12] Normal levels of 5′-nucleotidase are 2-17 units per liter.[13] Elevated levels may indicate cholestasis, destruction of liver cells, hepatitis (liver inflammation), liver ischemia, a liver tumor, or use of liver-damaging drugs. Pregnancy and certain medications (acetaminophen, halothane, isoniazid, methyldopa, nitrofurantoin) may interfere with the test.[12][13]

The test may also be referred to as 5′NT Levels Blood Test, CDF73 Levels Blood Test, and Ecto-5′-Nucleotidase Levels Blood Test.[12]

Lymphocyte 5′-nucleotidase in immunological disorders

Ecto-5′-nucleotidase is considered a maturation marker for T cells and B cells. This is due to the fact that the enzyme activity is approximately 10-times higher for peripheral T cells than thymocytes, 5-6 times higher in adult peripheral B cells than fetal B cells, and largely absent in non-T cell and non-B cell lymphocytes.[5][14] In immunodeficiency diseases with arrested lymphocyte maturation, ex-5′-nucleatidase activity is generally low.[5] Such diseases include severe combined immuno-deficiency, Wiskott–Aldrich syndrome, congenital X-linked agammaglobulinemia, selective IgA deficiency and acquired immune deficiency syndrome (AIDS).[5][15][16][17]

Relation to lead poisoning

Numerous studies have shown that erythrocyte pyrimidine 5′-nucleotidase activity is significantly lowered in patients with lead poisoning, and that pyrimidine 5′-nucleotidase activity can be used as an index of lead poisoning.[18] It is believed that lead induced deficiency of the enzyme in maturing erythroid cells is responsible for basophilic stippling and hemolysis in a manner analogous to the pathogenesis of the hereditary enzyme deficiency syndrome. The mechanism of inhibition of 5′-nucleotidase in lead poisoning may contribute to the hemolytic syndromes that occur in patients with acute lead poisoning.[5] Since erythrocyte pyrimidine 5′NT activity is inhibited in vitro by various metals (e.g., copper, zinc, cadmium, lead, mercury, and tin), it is likely that inhibition of pyrimidine 5′-nucleotidase may contribute to the hemolytic syndromes that occur in patients with acute poisoning by these metals.[5][19][20]

Cytosolic 5-nucleotidase II superactivity

Cytosolic 5-nucleotidase II superactivity has been associated with autism spectrum disorder via a disorder of carnitine biosynthesis.[21]

References

  1. ^ Knapp K, Zebisch M, Pippel J, El-Tayeb A, Müller CE, Sträter N (December 2012). "Crystal structure of the human ecto-5′-nucleotidase (CD73): insights into the regulation of purinergic signaling". Structure. 20 (12): 2161–73. doi:10.1016/j.str.2012.10.001. PMID 23142347.
  2. ^ Fleit H, Conklyn M, Stebbins RD, Silber R (December 1975). "Function of 5′-nucleotidase in the uptake of adenosine from AMP by human lymphocytes" (PDF). The Journal of Biological Chemistry. 250 (23): 8889–92. doi:10.1016/S0021-9258(19)40668-6. PMID 1194267.
  3. ^ Reis, Julian (1934). "Nucleotidase and its relation to the deamination of nucleotides in the heart and the muscles". Bulletin de la Société de Chimie Biologique. 16: 385–399.
  4. ^ a b c d e f Sidorov VP (1975). "[Factors affecting the frequency of exploratory thoracotomies in lung cancer]". Grudnaia Khirurgiia (2): 84–87. PMID 1132794.
  5. ^ a b c d e f Sunderman FW (1990). "The clinical biochemistry of 5′-nucleotidase" (PDF). Annals of Clinical and Laboratory Science. 20 (2): 123–39. PMID 2183704.
  6. ^ Koshland DE, Springhorn SS (July 1956). "Mechanism of action of 5′-nucleotidase". The Journal of Biological Chemistry. 221 (1): 469–76. doi:10.1016/S0021-9258(18)65265-2. PMID 13345835.
  7. ^ Gulland JM, Jackson EM (March 1938). "5-Nucleotidase". The Biochemical Journal. 32 (3): 597–601. doi:10.1042/bj0320597. PMC 1264072. PMID 16746659.
  8. ^ Heppel LA, Hilmore RJ (February 1951). "Purification and properties of 5-nucleotidase". The Journal of Biological Chemistry. 188 (2): 665–76. doi:10.1016/S0021-9258(19)77739-4. PMID 14824154.
  9. ^ Segal HL, Brenner BM (February 1960). "5′-Nucleotidase of rat liver microsomes". The Journal of Biological Chemistry. 235 (2): 471–4. doi:10.1016/S0021-9258(18)69548-1. PMID 14444527.
  10. ^ a b c Heuts DP, Weissenborn MJ, Olkhov RV, Shaw AM, Gummadova J, Levy C, Scrutton NS (November 2012). "Crystal structure of a soluble form of human CD73 with ecto-5′-nucleotidase activity". ChemBioChem. 13 (16): 2384–91. doi:10.1002/cbic.201200426. PMID 22997138. S2CID 44660514.
  11. ^ Dixon TF, Purdom M (November 1954). "Serum 5-nucleotidase". Journal of Clinical Pathology. 7 (4): 341–3. doi:10.1136/jcp.7.4.341. PMC 1023849. PMID 13286361.
  12. ^ a b c "5′-Nucleotidase Blood Test". DoveMed. Retrieved 28 February 2016.
  13. ^ a b Greco, Frank. "5′-nucleotidase". MedlinePlus. U.S. National Library of Medicine. Retrieved 28 February 2016.
  14. ^ Edwards NL, Gelfand EW, Burk L, Dosch HM, Fox IH (July 1979). "Distribution of 5′-nucleotidase in human lymphoid tissues". Proceedings of the National Academy of Sciences of the United States of America. 76 (7): 3474–6. Bibcode:1979PNAS...76.3474E. doi:10.1073/pnas.76.7.3474. PMC 383848. PMID 315065.
  15. ^ Salazar-Gonzalez JF, Moody DJ, Giorgi JV, Martinez-Maza O, Mitsuyasu RT, Fahey JL (September 1985). "Reduced ecto-5′-nucleotidase activity and enhanced OKT10 and HLA-DR expression on CD8 (T suppressor/cytotoxic) lymphocytes in the acquired immune deficiency syndrome: evidence of CD8 cell immaturity". Journal of Immunology. 135 (3): 1778–85. doi:10.4049/jimmunol.135.3.1778. PMID 2991373.
  16. ^ Webster AD, North M, Allsop J, Asherson GL, Watts RW (March 1978). "Purine metabolism in lymphocytes from patients with primary hypogammaglobulinaemia". Clinical and Experimental Immunology. 31 (3): 456–63. PMC 1541241. PMID 207476.
  17. ^ Boss GR, Thompson LF, O'Connor RD, Ziering RW, Seegmiller JE (April 1981). "Ecto-5′-nucleotidase deficiency: association with adenosine deaminase deficiency and nonassociation with deoxyadenosine toxicity". Clinical Immunology and Immunopathology. 19 (1): 1–7. doi:10.1016/0090-1229(81)90042-8. PMID 6260402.
  18. ^ Paglia DE, Valentine WN, Dahlgren JG (November 1975). "Effects of low-level lead exposure on pyrimidine 5′-nucleotidase and other erythrocyte enzymes. Possible role of pyrimidine 5′-nucleotidase in the pathogenesis of lead-induced anemia". The Journal of Clinical Investigation. 56 (5): 1164–9. doi:10.1172/jci108192. PMC 301979. PMID 1184742.
  19. ^ Cook L, Kubitschek C, Stohs S, Angle C (June 1988). "Erythrocyte pyrimidine 5′-nucleotidase and deoxynucleotidase isozymes: metallosensitivity and kinetics". Drug and Chemical Toxicology. 11 (2): 195–213. doi:10.3109/01480548808998222. PMID 2841083.
  20. ^ Mohammed-Brahim B, Buchet JP, Bernard A, Lauwerys R (February 1984). "In vitro effects of lead, mercury and cadmium on the enzymic activity of red-blood cell pyrimidine 5′-nucleotidase". Toxicology Letters. 20 (2): 195–9. doi:10.1016/0378-4274(84)90147-4. PMID 6320500.
  21. ^ Hyman, Susan L.; Levy, Susan E.; Myers, Scott M.; COUNCIL ON CHILDREN WITH DISABILITIES, SECTION ON DEVELOPMENTAL AND BEHAVIORAL PEDIATRICS; Kuo, Dennis Z.; Apkon, Susan; Davidson, Lynn F.; Ellerbeck, Kathryn A.; Foster, Jessica E.A.; Noritz, Garey H.; Leppert, Mary O’Connor (2020-01-01). "Identification, Evaluation, and Management of Children With Autism Spectrum Disorder". Pediatrics. 145 (1): e20193447. doi:10.1542/peds.2019-3447. ISSN 0031-4005. PMID 31843864. S2CID 209390456.